Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | DIC56_01235 | Not Available | Positive | 269004 - 269630 | 21982.1 |
| cytochrome c biogenesis protein | DIC56_01240 | Not Available | Positive | 269647 - 270390 | 25585.3 |
| sodium:calcium exchanger | DIC56_01245 | Not Available | Positive | 270443 - 271444 | 35596.9 |
| signal peptidase ii | DIC56_01250 | Not Available | Positive | 271483 - 271947 | 16951.1 |
| hypothetical protein | DIC56_01260 | Not Available | Positive | 273605 - 274553 | 34836.8 |
| phosphoenolpyruvate synthase regulatory protein | DIC56_01265 | Not Available | Positive | 274554 - 274868 | 11543.0 |
| septum formation inhibitor maf | DIC56_01270 | Not Available | Positive | 274911 - 275510 | 21746.3 |
| shikimate dehydrogenase | DIC56_01275 | Not Available | Positive | 275503 - 276363 | 30940.0 |
| dephospho-coa kinase | DIC56_01280 | Not Available | Positive | 276360 - 276965 | 21828.4 |
| dna polymerase iii subunit epsilon | DIC56_01285 | Not Available | Positive | 276958 - 277126 | 6408.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
