Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4242 domain-containing protein | DIC56_14490 | Not Available | Positive | 2913638 - 2913943 | 11354.3 |
| alpha/beta hydrolase | DIC56_14495 | Not Available | Positive | 2913990 - 2914862 | 32687.9 |
| crp/fnr family transcriptional regulator | DIC56_14500 | Not Available | Positive | 2915301 - 2916035 | 27195.1 |
| isochorismatase | DIC56_14505 | Not Available | Negative | 2916614 - 2917327 | 25441.7 |
| murr/rpir family transcriptional regulator | DIC56_14510 | Not Available | Negative | 2918336 - 2919187 | 30722.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DIC56_14515 | Not Available | Positive | 2919453 - 2920709 | 43711.1 |
| n-acetylglucosamine kinase | DIC56_14520 | Not Available | Positive | 2920706 - 2921596 | 30845.7 |
| n-acetylmuramic acid 6-phosphate etherase | DIC56_14525 | Not Available | Positive | 2921959 - 2922900 | 32922.9 |
| abc transporter substrate-binding protein | DIC56_14530 | Not Available | Positive | 2922965 - 2924491 | 54658.5 |
| glutathione abc transporter permease gsic | DIC56_14535 | Not Available | Positive | 2924534 - 2925493 | 34845.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
