Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | DIC56_01135 | Not Available | Negative | 245524 - 246699 | 41679.2 |
| lysr family transcriptional regulator | DIC56_01140 | Not Available | Negative | 246716 - 247726 | 36538.5 |
| agmatinase | DIC56_01145 | Not Available | Positive | 247902 - 248957 | 37785.2 |
| abc transporter substrate-binding protein | DIC56_01150 | Not Available | Positive | 249041 - 250129 | 39335.0 |
| polyamine abc transporter atp-binding protein | DIC56_01155 | Not Available | Positive | 250239 - 251273 | 36839.1 |
| abc transporter permease | DIC56_01160 | Not Available | Positive | 251270 - 252124 | 31014.3 |
| spermidine/putrescine abc transporter permease | DIC56_01165 | Not Available | Positive | 252121 - 252921 | 28800.7 |
| 3-hydroxyisobutyrate dehydrogenase | DIC56_01170 | Not Available | Negative | 253546 - 254421 | 29127.2 |
| choline dehydrogenase | DIC56_01175 | Not Available | Negative | 254444 - 256039 | 58222.3 |
| branched-chain amino acid abc transporter permease | DIC56_01180 | Not Available | Negative | 256145 - 257131 | 35618.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
