Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit b | DIC56_13705 | Not Available | Positive | 2748457 - 2749209 | 27637.8 |
| f0f1 atp synthase subunit alpha | DIC56_13710 | Not Available | Positive | 2749202 - 2750653 | 52341.4 |
| hypothetical protein | DIC56_13715 | Not Available | Positive | 2750650 - 2751468 | 29784.2 |
| hypothetical protein | DIC56_13720 | Not Available | Negative | 2751545 - 2752132 | 21039.2 |
| abc transporter substrate-binding protein | DIC56_13725 | Not Available | Positive | 2752731 - 2754326 | 58710.6 |
| peptide abc transporter permease | DIC56_13730 | Not Available | Positive | 2754492 - 2755496 | 36286.9 |
| dipeptide abc transporter permease dppc | DIC56_13735 | Not Available | Positive | 2755511 - 2756428 | 33079.2 |
| nickel import atp-binding protein nikd | DIC56_13740 | Not Available | Positive | 2756430 - 2757281 | 30818.7 |
| peptide abc transporter atp-binding protein | DIC56_13745 | Not Available | Positive | 2757311 - 2758144 | 30576.9 |
| amidase | DIC56_13750 | Not Available | Negative | 2758148 - 2759542 | 50447.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
