Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonoyl-coa carboxylase | DIC56_13605 | Not Available | Positive | 2727303 - 2728910 | 57826.4 |
| enoyl-coa hydratase | DIC56_13610 | Not Available | Positive | 2728915 - 2729709 | 28082.8 |
| 3-methylcrotonyl-coa carboxylase | DIC56_13615 | Not Available | Positive | 2729706 - 2731703 | 72015.1 |
| hydroxymethylglutaryl-coa lyase | DIC56_13620 | Not Available | Positive | 2731700 - 2732596 | 31014.6 |
| methyltransferase | DIC56_13625 | Not Available | Negative | 2732827 - 2733870 | 39161.5 |
| ggdef-domain containing protein | DIC56_13630 | Not Available | Positive | 2734159 - 2736189 | 75865.4 |
| hypothetical protein | DIC56_13635 | Not Available | Negative | 2736340 - 2737101 | 27194.9 |
| patatin | DIC56_13640 | Not Available | Positive | 2737329 - 2738759 | 51785.6 |
| 3-oxoacyl-acp reductase | DIC56_13645 | Not Available | Negative | 2738933 - 2739688 | 27319.4 |
| cupin domain-containing protein | DIC56_13650 | Not Available | Negative | 2739789 - 2740184 | 14293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
