Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DIC56_13395 | Not Available | Negative | 2686159 - 2687001 | 32095.6 |
| cold-shock protein | DIC56_13400 | Not Available | Positive | 2687406 - 2687687 | 10149.0 |
| 30s ribosomal protein s21 | DIC56_13405 | Not Available | Positive | 2687889 - 2688131 | 9385.76 |
| thiamine diphosphokinase | DIC56_13410 | Not Available | Positive | 2688216 - 2688866 | 22692.3 |
| glycosyl transferase family 1 | DIC56_13420 | Not Available | Negative | 2690600 - 2692402 | 66534.7 |
| thiamine abc transporter substrate binding subunit | DIC56_13425 | Not Available | Positive | 2692761 - 2693789 | 37505.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DIC56_13430 | Not Available | Positive | 2693795 - 2695438 | 57660.6 |
| thiamine abc transporter atp-binding protein | DIC56_13435 | Not Available | Positive | 2695422 - 2696138 | 25677.1 |
| metalloprotease | DIC56_13440 | Not Available | Positive | 2696433 - 2697938 | 54416.7 |
| rna polymerase factor sigma-32 | DIC56_13445 | Not Available | Negative | 2697971 - 2698846 | 33014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
