Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | DIC56_13245 | Not Available | Positive | 2660876 - 2661253 | 13914.7 |
| ribosome maturation factor rimm | DIC56_13250 | Not Available | Positive | 2661291 - 2661953 | 24076.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DIC56_13255 | Not Available | Positive | 2661964 - 2662671 | 25783.0 |
| hypothetical protein | DIC56_13260 | Not Available | Negative | 2662653 - 2663399 | 25652.3 |
| 50s ribosomal protein l19 | DIC56_13265 | Not Available | Positive | 2663676 - 2664227 | 19647.3 |
| basic amino acid abc transporter substrate-binding protein | DIC56_13270 | Not Available | Positive | 2664356 - 2665153 | 28417.8 |
| amino acid abc transporter | DIC56_13275 | Not Available | Positive | 2665189 - 2666016 | 30401.2 |
| hypothetical protein | DIC56_13280 | Not Available | Positive | 2666109 - 2666225 | 4163.22 |
| 3-isopropylmalate dehydratase large subunit | DIC56_13285 | Not Available | Positive | 2666299 - 2667708 | 50977.7 |
| hypothetical protein | DIC56_13290 | Not Available | Positive | 2667898 - 2668449 | 20169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
