Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DIC56_01085 | Not Available | Negative | 233590 - 234801 | 43142.4 |
| abc transporter atp-binding protein | DIC56_01090 | Not Available | Negative | 234801 - 236336 | 56369.3 |
| sugar abc transporter substrate-binding protein | DIC56_01095 | Not Available | Negative | 236453 - 237523 | 38374.6 |
| lysr family transcriptional regulator | DIC56_01100 | Not Available | Positive | 237694 - 238635 | 33519.8 |
| tripartite tricarboxylate transporter tcta | DIC56_01105 | Not Available | Negative | 238746 - 240257 | 52179.5 |
| tripartite tricarboxylate transporter tctb family protein | DIC56_01110 | Not Available | Negative | 240309 - 240767 | 16090.2 |
| tricarboxylic transporter | DIC56_01115 | Not Available | Negative | 241025 - 241999 | 34178.0 |
| dna-binding response regulator | DIC56_01120 | Not Available | Positive | 242363 - 243040 | 25336.8 |
| sensor histidine kinase | DIC56_01125 | Not Available | Positive | 243027 - 244418 | 50370.5 |
| abc transporter substrate-binding protein | DIC56_01130 | Not Available | Positive | 244415 - 245503 | 39897.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
