Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbe family thiol:disulfide interchange protein | DIC56_13195 | Not Available | Positive | 2651802 - 2652407 | 21474.0 |
| hypothetical protein | DIC56_13200 | Not Available | Negative | 2652418 - 2653014 | 22113.4 |
| septation protein a | DIC56_13205 | Not Available | Negative | 2653011 - 2653661 | 24134.1 |
| signal recognition particle-docking protein ftsy | DIC56_13210 | Not Available | Negative | 2653720 - 2655075 | 48178.3 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DIC56_13215 | Not Available | Negative | 2655094 - 2656368 | 46564.1 |
| diaminopimelate epimerase | DIC56_13220 | Not Available | Negative | 2656365 - 2657270 | 32794.0 |
| hypothetical protein | DIC56_13225 | Not Available | Negative | 2657355 - 2658356 | 36910.0 |
| aldehyde-activating protein | DIC56_13230 | Not Available | Positive | 2658467 - 2658847 | 13846.5 |
| signal recognition particle protein | DIC56_13235 | Not Available | Positive | 2658955 - 2660504 | 53885.0 |
| chorismate mutase | DIC56_13240 | Not Available | Positive | 2660518 - 2660838 | 12001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
