Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | DIC56_12990 | Not Available | Negative | 2608883 - 2610292 | 49215.9 |
| transglutaminase | DIC56_13000 | Not Available | Negative | 2611558 - 2612169 | 22471.8 |
| pilus assembly protein pilz | DIC56_13005 | Not Available | Negative | 2612707 - 2613318 | 22595.5 |
| rhomboid family intramembrane serine protease | DIC56_13010 | Not Available | Positive | 2613650 - 2614396 | 26803.8 |
| inosine-5-monophosphate dehydrogenase | DIC56_13015 | Not Available | Positive | 2614590 - 2615024 | 15582.0 |
| patatin | DIC56_13020 | Not Available | Negative | 2615071 - 2616030 | 33932.4 |
| phosphoribosyl-amp cyclohydrolase | DIC56_13025 | Not Available | Negative | 2616137 - 2616598 | 16929.8 |
| gtp cyclohydrolase i fole | DIC56_13030 | Not Available | Negative | 2616628 - 2617233 | 22155.7 |
| iron-sulfur cluster assembly scaffold protein | DIC56_13035 | Not Available | Positive | 2617511 - 2617960 | 16012.1 |
| membrane protein insertion efficiency factor yidd | DIC56_13040 | Not Available | Positive | 2617966 - 2618349 | 14520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
