Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | DIC56_12890 | Not Available | Positive | 2589493 - 2590260 | 28090.7 |
| elongation factor ts | DIC56_12895 | Not Available | Positive | 2590530 - 2591456 | 32210.8 |
| ump kinase | DIC56_12900 | Not Available | Positive | 2591559 - 2592281 | 24881.0 |
| ribosome recycling factor | DIC56_12905 | Not Available | Positive | 2592334 - 2592894 | 20747.9 |
| isoprenyl transferase | DIC56_12910 | Not Available | Positive | 2592944 - 2593687 | 27686.1 |
| phosphatidate cytidylyltransferase | DIC56_12915 | Not Available | Positive | 2593696 - 2594529 | 29295.1 |
| rip metalloprotease rsep | DIC56_12920 | Not Available | Positive | 2594558 - 2595691 | 40411.4 |
| outer membrane protein assembly factor bama | DIC56_12925 | Not Available | Positive | 2595889 - 2598219 | 84833.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DIC56_12930 | Not Available | Positive | 2598270 - 2599334 | 36472.9 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DIC56_12935 | Not Available | Positive | 2599327 - 2599794 | 17175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
