Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin family protein | DIC56_12840 | Not Available | Positive | 2580543 - 2580902 | 12863.2 |
| atp-dependent clp protease adapter clps | DIC56_12845 | Not Available | Positive | 2581167 - 2581514 | 13400.3 |
| atp-dependent clp protease atp-binding subunit clpa | DIC56_12850 | Not Available | Positive | 2581524 - 2584007 | 90698.6 |
| azlc family protein | DIC56_12855 | Not Available | Positive | 2584098 - 2584853 | 26984.9 |
| branched-chain amino acid transport | DIC56_12860 | Not Available | Positive | 2584853 - 2585191 | 12081.0 |
| hit family protein | DIC56_12865 | Not Available | Negative | 2585462 - 2585887 | 15389.7 |
| gnat family n-acetyltransferase | DIC56_12870 | Not Available | Negative | 2585949 - 2587145 | 44937.6 |
| glycerophosphodiester phosphodiesterase | DIC56_12875 | Not Available | Negative | 2587156 - 2587881 | 26532.8 |
| hypothetical protein | DIC56_12880 | Not Available | Negative | 2587878 - 2588348 | 15983.4 |
| duf1849 domain-containing protein | DIC56_12885 | Not Available | Positive | 2588468 - 2589295 | 29838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
