Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DIC56_12790 | Not Available | Negative | 2570829 - 2571983 | 42295.2 |
| amino acid abc transporter permease | DIC56_12795 | Not Available | Negative | 2571985 - 2573178 | 42556.5 |
| amino acid abc transporter substrate-bindnig protein | DIC56_12800 | Not Available | Negative | 2573280 - 2574308 | 37180.9 |
| cystathionine beta-lyase | DIC56_12805 | Not Available | Positive | 2574668 - 2575858 | 43043.4 |
| salicylate hydroxylase | DIC56_12810 | Not Available | Negative | 2575861 - 2577024 | 41848.1 |
| zinc-finger domain-containing protein | DIC56_12815 | Not Available | Negative | 2577055 - 2577300 | 9002.68 |
| alpha/beta hydrolase | DIC56_12820 | Not Available | Positive | 2577471 - 2578256 | 28191.6 |
| enoyl-coa hydratase | DIC56_12825 | Not Available | Negative | 2578272 - 2579075 | 27835.1 |
| serine o-acetyltransferase | DIC56_12830 | Not Available | Positive | 2579150 - 2579974 | 30090.0 |
| duf3126 domain-containing protein | DIC56_12835 | Not Available | Positive | 2580150 - 2580353 | 7752.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
