Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | DIC56_12690 | Not Available | Positive | 2554622 - 2555473 | 31371.6 |
| hypothetical protein | DIC56_12695 | Not Available | Negative | 2555501 - 2556355 | 31367.7 |
| type i methionyl aminopeptidase | DIC56_12700 | Not Available | Negative | 2556359 - 2557195 | 30302.3 |
| dna/rna nuclease sfsa | DIC56_12705 | Not Available | Negative | 2557229 - 2557957 | 26461.7 |
| class i poly(r)-hydroxyalkanoic acid synthase | DIC56_12710 | Not Available | Negative | 2557969 - 2559714 | 64860.0 |
| hypothetical protein | DIC56_12715 | Not Available | Positive | 2560005 - 2560385 | 13161.6 |
| ll-diaminopimelate aminotransferase | DIC56_12720 | Not Available | Positive | 2560612 - 2561829 | 44553.7 |
| homoserine dehydrogenase | DIC56_12725 | Not Available | Positive | 2561933 - 2563252 | 46485.9 |
| single-stranded-dna-specific exonuclease recj | DIC56_12730 | Not Available | Positive | 2563365 - 2565167 | 63166.8 |
| Trna-glu | Not Available | Not Available | Positive | 2565202 - 2565276 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
