Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | DIC56_12375 | Not Available | Negative | 2495822 - 2497492 | 60495.3 |
| 6-aminohexanoate hydrolase | DIC56_12380 | Not Available | Negative | 2497530 - 2498705 | 43196.0 |
| putrescine/spermidine abc transporter substrate-binding protein | DIC56_12385 | Not Available | Negative | 2498778 - 2499812 | 37867.2 |
| spermidine/putrescine abc transporter permease potc | DIC56_12390 | Not Available | Negative | 2499830 - 2500639 | 29834.9 |
| abc transporter permease | DIC56_12395 | Not Available | Negative | 2500632 - 2501546 | 33375.9 |
| spermidine/putrescine abc transporter atp-binding protein | DIC56_12400 | Not Available | Negative | 2501549 - 2502649 | 39910.1 |
| peptidase | DIC56_12405 | Not Available | Positive | 2503166 - 2504218 | 37448.6 |
| abc transporter substrate-binding protein | DIC56_12410 | Not Available | Positive | 2504270 - 2505549 | 46408.4 |
| radical sam protein | DIC56_12415 | Not Available | Negative | 2505550 - 2505719 | 6417.83 |
| nad-dependent epimerase/dehydratase | DIC56_12420 | Not Available | Negative | 2505682 - 2506578 | 32541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
