Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | DIC56_12325 | Not Available | Negative | 2486339 - 2486848 | 18296.6 |
| c4-dicarboxylate abc transporter | DIC56_12330 | Not Available | Negative | 2486924 - 2487913 | 36411.6 |
| glucuronate isomerase | DIC56_12335 | Not Available | Negative | 2487948 - 2489354 | 52656.5 |
| gntr family transcriptional regulator | DIC56_12340 | Not Available | Positive | 2489453 - 2490154 | 26176.3 |
| 2-dehydro-3-deoxygluconokinase | DIC56_12345 | Not Available | Positive | 2490151 - 2491065 | 32760.8 |
| fuconate dehydratase | DIC56_12350 | Not Available | Negative | 2491099 - 2492376 | 47206.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DIC56_12355 | Not Available | Negative | 2492408 - 2493250 | 29570.5 |
| nad(p)-dependent oxidoreductase | DIC56_12360 | Not Available | Negative | 2493272 - 2494003 | 25219.3 |
| iclr family transcriptional regulator | DIC56_12365 | Not Available | Positive | 2494344 - 2495132 | 28481.5 |
| tetr/acrr family transcriptional regulator | DIC56_12370 | Not Available | Negative | 2495149 - 2495814 | 24998.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
