Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | DIC56_12275 | Not Available | Negative | 2475390 - 2475554 | 5615.55 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | DIC56_12280 | Not Available | Positive | 2475852 - 2477423 | 55463.7 |
| nad(p) transhydrogenase subunit beta | DIC56_12285 | Not Available | Positive | 2477437 - 2478876 | 49759.4 |
| galactonate dehydratase | DIC56_12290 | Not Available | Negative | 2478986 - 2480518 | 53725.1 |
| mannonate dehydratase | DIC56_12295 | Not Available | Negative | 2480511 - 2481707 | 44378.6 |
| mannitol dehydrogenase | DIC56_12300 | Not Available | Negative | 2481704 - 2483161 | 53154.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DIC56_12305 | Not Available | Negative | 2483139 - 2483885 | 25721.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DIC56_12310 | Not Available | Negative | 2483882 - 2484703 | 30334.4 |
| cupin | DIC56_12315 | Not Available | Negative | 2484722 - 2485045 | 11495.6 |
| c4-dicarboxylate abc transporter permease | DIC56_12320 | Not Available | Negative | 2485056 - 2486336 | 45180.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
