Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | DIC56_12225 | Not Available | Positive | 2469854 - 2470189 | 11594.5 |
| hypothetical protein | DIC56_12230 | Not Available | Positive | 2470193 - 2470630 | 15111.2 |
| hypothetical protein | DIC56_12235 | Not Available | Negative | 2470679 - 2470876 | 7270.47 |
| response regulator | DIC56_12240 | Not Available | Positive | 2471025 - 2471819 | 28902.7 |
| sensor histidine kinase | DIC56_12245 | Not Available | Positive | 2471930 - 2472928 | 37794.3 |
| hypothetical protein | DIC56_12250 | Not Available | Positive | 2473004 - 2473342 | 11990.7 |
| duf1328 domain-containing protein | DIC56_12255 | Not Available | Negative | 2473514 - 2473678 | 5703.46 |
| hypothetical protein | DIC56_12260 | Not Available | Positive | 2473828 - 2474040 | 7706.13 |
| rna polymerase subunit sigma | DIC56_12265 | Not Available | Positive | 2474037 - 2474606 | 20929.8 |
| hypothetical protein | DIC56_12270 | Not Available | Negative | 2474603 - 2475025 | 15116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
