Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DIC56_12015 | Not Available | Negative | 2431292 - 2431570 | 9638.45 |
| wgr domain-containing protein | DIC56_12020 | Not Available | Negative | 2431711 - 2431968 | 9710.46 |
| ti-type conjugative transfer system protein trag | DIC56_12025 | Not Available | Negative | 2432216 - 2434138 | 69436.3 |
| conjugal transfer protein trad | DIC56_12030 | Not Available | Negative | 2434131 - 2434376 | 9100.08 |
| conjugal transfer protein trac | DIC56_12035 | Not Available | Negative | 2434351 - 2434647 | 10210.9 |
| sel1 repeat family protein | DIC56_12040 | Not Available | Negative | 2434875 - 2434954 | 3025.62 |
| duf2147 domain-containing protein | DIC56_12045 | Not Available | Positive | 2435492 - 2435833 | 11372.8 |
| 4-oxalocrotonate tautomerase | DIC56_12050 | Not Available | Negative | 2435920 - 2436138 | 8068.63 |
| 3-ketoacyl-acp reductase | DIC56_12055 | Not Available | Negative | 2436186 - 2436926 | 25448.5 |
| lysr family transcriptional regulator | DIC56_12060 | Not Available | Positive | 2437028 - 2437921 | 33073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
