Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DIC56_11910 | Not Available | Negative | 2417008 - 2417667 | 25110.8 |
| yicc family protein | DIC56_11915 | Not Available | Negative | 2417672 - 2418562 | 32790.3 |
| endolytic transglycosylase mltg | DIC56_11920 | Not Available | Negative | 2418586 - 2419610 | 37077.1 |
| sam-dependent methyltransferase | DIC56_11925 | Not Available | Positive | 2419611 - 2419762 | 5537.51 |
| class i sam-dependent methyltransferase | DIC56_11930 | Not Available | Negative | 2419790 - 2420527 | 27287.2 |
| coproporphyrinogen iii oxidase | DIC56_11935 | Not Available | Negative | 2420558 - 2421739 | 43755.1 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | DIC56_11940 | Not Available | Negative | 2421747 - 2422391 | 23065.9 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DIC56_11945 | Not Available | Negative | 2422404 - 2422722 | 11471.7 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | DIC56_11950 | Not Available | Negative | 2422723 - 2423693 | 32812.4 |
| hypothetical protein | DIC56_11955 | Not Available | Negative | 2423895 - 2424188 | 10996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
