Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | DIC56_11645 | Not Available | Positive | 2371131 - 2372081 | 32942.5 |
| 6-aminohexanoate hydrolase | DIC56_11650 | Not Available | Negative | 2372085 - 2373455 | 48149.8 |
| duf3419 domain-containing protein | DIC56_11655 | Not Available | Positive | 2373696 - 2374943 | 47543.8 |
| sam-dependent methyltransferase | DIC56_11660 | Not Available | Positive | 2374943 - 2375605 | 24512.5 |
| glycoside hydrolase | DIC56_11665 | Not Available | Positive | 2375737 - 2376516 | 29970.4 |
| lytic murein transglycosylase | DIC56_11670 | Not Available | Positive | 2376694 - 2377309 | 21661.8 |
| integrase | DIC56_11675 | Not Available | Positive | 2377310 - 2378473 | 43817.4 |
| integrase | DIC56_11680 | Not Available | Positive | 2378470 - 2379432 | 36034.7 |
| integrase | DIC56_11685 | Not Available | Positive | 2379425 - 2380429 | 37619.5 |
| hypothetical protein | DIC56_11695 | Not Available | Positive | 2381852 - 2382457 | 23245.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
