Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | DIC56_11545 | Not Available | Negative | 2348491 - 2349327 | 30325.5 |
| d-alanine--d-alanine ligase | DIC56_11550 | Not Available | Negative | 2349405 - 2350331 | 33175.6 |
| udp-n-acetylenolpyruvoylglucosamine reductase | DIC56_11555 | Not Available | Negative | 2350728 - 2351702 | 35243.4 |
| udp-n-acetylmuramate--l-alanine ligase | DIC56_11560 | Not Available | Negative | 2351703 - 2353115 | 50851.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DIC56_11565 | Not Available | Negative | 2353112 - 2354233 | 39158.4 |
| putative lipid ii flippase ftsw | DIC56_11570 | Not Available | Negative | 2354240 - 2355394 | 42020.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DIC56_11575 | Not Available | Negative | 2355396 - 2356805 | 48798.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DIC56_11580 | Not Available | Negative | 2356813 - 2357913 | 39164.8 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | DIC56_11585 | Not Available | Negative | 2357938 - 2359371 | 50544.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DIC56_11590 | Not Available | Negative | 2359368 - 2360828 | 51083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
