Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | DIC56_11395 | Not Available | Negative | 2312873 - 2314054 | 41779.2 |
| atp-dependent dna helicase | DIC56_11400 | Not Available | Positive | 2314331 - 2316787 | 91993.3 |
| hypothetical protein | DIC56_11405 | Not Available | Negative | 2316825 - 2317106 | 10608.9 |
| endonuclease | DIC56_11410 | Not Available | Negative | 2317209 - 2318261 | 40023.5 |
| bifunctional nicotinamidase/pyrazinamidase | DIC56_11415 | Not Available | Positive | 2318445 - 2319071 | 22280.4 |
| pantoate--beta-alanine ligase | DIC56_11420 | Not Available | Positive | 2319158 - 2320030 | 31605.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DIC56_11425 | Not Available | Positive | 2320032 - 2320859 | 29717.8 |
| duf2164 domain-containing protein | DIC56_11430 | Not Available | Negative | 2320878 - 2321126 | 9330.14 |
| branched-chain amino acid abc transporter permease | DIC56_11435 | Not Available | Positive | 2321273 - 2321989 | 24915.6 |
| hypothetical protein | DIC56_11440 | Not Available | Positive | 2321986 - 2322297 | 10886.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
