Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | DIC56_10795 | Not Available | Positive | 2186273 - 2187307 | 37779.7 |
| protoporphyrinogen oxidase hemj | DIC56_10800 | Not Available | Positive | 2187307 - 2187849 | 20140.4 |
| transcription termination factor rho | DIC56_10805 | Not Available | Positive | 2188041 - 2189306 | 46935.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DIC56_10810 | Not Available | Positive | 2189465 - 2190802 | 48095.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DIC56_10815 | Not Available | Positive | 2190898 - 2192769 | 67555.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DIC56_10820 | Not Available | Positive | 2192774 - 2193409 | 23761.5 |
| chromosome partitioning protein para | DIC56_10825 | Not Available | Positive | 2193426 - 2194220 | 28838.9 |
| chromosome partitioning protein parb | DIC56_10830 | Not Available | Positive | 2194254 - 2195135 | 32285.5 |
| dna polymerase iii subunit delta | DIC56_10835 | Not Available | Negative | 2195148 - 2196197 | 38408.1 |
| hypothetical protein | DIC56_10840 | Not Available | Negative | 2196210 - 2196665 | 16126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
