Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | DIC56_00830 | Not Available | Negative | 177888 - 178595 | 25705.0 |
| hypothetical protein | DIC56_00835 | Not Available | Negative | 178596 - 179414 | 28919.0 |
| cytochrome c biogenesis protein | DIC56_00840 | Not Available | Negative | 179414 - 181252 | 64034.6 |
| dna-binding response regulator | DIC56_00845 | Not Available | Positive | 181366 - 182028 | 24185.2 |
| two-component sensor histidine kinase | DIC56_00850 | Not Available | Positive | 182025 - 183395 | 49064.8 |
| hypothetical protein | DIC56_00855 | Not Available | Positive | 183602 - 184771 | 41663.0 |
| antar domain-containing protein | DIC56_00860 | Not Available | Positive | 184768 - 185376 | 22143.3 |
| peptide abc transporter permease | DIC56_00865 | Not Available | Positive | 185417 - 186259 | 30441.9 |
| glutathione abc transporter permease gsic | DIC56_00870 | Not Available | Positive | 186259 - 187179 | 33249.1 |
| peptide abc transporter substrate-binding protein | DIC56_00875 | Not Available | Positive | 187234 - 188817 | 57967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
