Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iia | DIC56_10645 | Not Available | Positive | 2152292 - 2152693 | 14358.5 |
| hpr family phosphocarrier protein | DIC56_10650 | Not Available | Positive | 2152712 - 2152987 | 9526.59 |
| adenosylhomocysteinase | DIC56_10655 | Not Available | Positive | 2153167 - 2154567 | 50971.1 |
| alkaline phosphatase | DIC56_10660 | Not Available | Positive | 2154875 - 2157367 | 91977.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DIC56_10665 | Not Available | Positive | 2157364 - 2158893 | 57744.1 |
| mannose-1-phosphate guanylyltransferase | DIC56_10670 | Not Available | Positive | 2158890 - 2159621 | 26751.4 |
| double-strand break repair protein addb | DIC56_10675 | Not Available | Positive | 2159625 - 2162810 | 116730.0 |
| double-strand break repair helicase adda | DIC56_10680 | Not Available | Positive | 2162800 - 2166357 | 130550.0 |
| thioredoxin | DIC56_10685 | Not Available | Positive | 2166431 - 2166751 | 11337.6 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DIC56_10690 | Not Available | Negative | 2166800 - 2168095 | 46070.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
