Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | DIC56_10595 | Not Available | Positive | 2143257 - 2144045 | 27783.2 |
| phosphoribosyl-atp diphosphatase | DIC56_10600 | Not Available | Positive | 2144066 - 2144389 | 11683.0 |
| type i pantothenate kinase | DIC56_10605 | Not Available | Positive | 2144386 - 2145381 | 37784.2 |
| alkylated dna repair dioxygenase | DIC56_10610 | Not Available | Negative | 2145410 - 2146012 | 22279.9 |
| peptidoglycan-binding protein lysm | DIC56_10615 | Not Available | Negative | 2146051 - 2146524 | 16768.2 |
| aminoacyl-trna hydrolase | DIC56_10620 | Not Available | Negative | 2146614 - 2147048 | 16178.6 |
| phosphoenolpyruvate carboxykinase (atp) | DIC56_10625 | Not Available | Negative | 2147167 - 2148777 | 58013.0 |
| dna-binding response regulator | DIC56_10630 | Not Available | Positive | 2149099 - 2149839 | 27710.3 |
| histidine kinase | DIC56_10635 | Not Available | Positive | 2149926 - 2151707 | 65505.9 |
| hypothetical protein | DIC56_10640 | Not Available | Positive | 2151704 - 2152183 | 16377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
