Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | DIC56_10540 | Not Available | Positive | 2133126 - 2133884 | 27649.4 |
| prephenate dehydratase | DIC56_10545 | Not Available | Positive | 2133895 - 2134749 | 31403.1 |
| nad(+) diphosphatase | DIC56_10550 | Not Available | Negative | 2134772 - 2135731 | 35736.5 |
| diadenosine tetraphosphate hydrolase | DIC56_10555 | Not Available | Negative | 2135728 - 2136138 | 15385.7 |
| malate synthase g | DIC56_10560 | Not Available | Negative | 2136287 - 2137677 | 50356.1 |
| hypothetical protein | DIC56_10565 | Not Available | Negative | 2137878 - 2138792 | 33779.1 |
| hslu--hslv peptidase atpase subunit | DIC56_10570 | Not Available | Negative | 2138998 - 2140308 | 48025.7 |
| hslu--hslv peptidase proteolytic subunit | DIC56_10575 | Not Available | Negative | 2140348 - 2140908 | 19877.9 |
| imidazole glycerol phosphate synthase subunit hish | DIC56_10585 | Not Available | Positive | 2141836 - 2142486 | 23320.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DIC56_10590 | Not Available | Positive | 2142510 - 2143247 | 25772.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
