Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_09950 | Not Available | Positive | 2012942 - 2013415 | 17805.4 |
| protein-tyrosine-phosphatase | DIC56_09955 | Not Available | Positive | 2013421 - 2013900 | 17644.2 |
| translation initiation factor if-1 | DIC56_09960 | Not Available | Positive | 2014020 - 2014238 | 8342.3 |
| septum formation inhibitor maf | DIC56_09965 | Not Available | Positive | 2014277 - 2014897 | 22577.4 |
| dna gyrase inhibitor yacg | DIC56_09970 | Not Available | Positive | 2014901 - 2015113 | 8041.25 |
| Trna-phe | Not Available | Not Available | Positive | 2015316 - 2015391 | Not Available |
| hypothetical protein | DIC56_09980 | Not Available | Negative | 2015777 - 2016229 | 16803.0 |
| lysr family transcriptional regulator | DIC56_09990 | Not Available | Negative | 2016557 - 2017432 | 31477.8 |
| rtx toxin | DIC56_09995 | Not Available | Positive | 2017901 - 2024719 | 238439.0 |
| type i secretion system permease/atpase | DIC56_10000 | Not Available | Positive | 2024883 - 2026610 | 61072.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
