Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DIC56_09690 | Not Available | Positive | 1954825 - 1955502 | 24473.5 |
| sensor histidine kinase | DIC56_09695 | Not Available | Positive | 1955499 - 1956887 | 48747.6 |
| methionine synthase | DIC56_09700 | Not Available | Positive | 1956971 - 1958544 | 58013.9 |
| hypothetical protein | DIC56_09705 | Not Available | Negative | 1958768 - 1959646 | 31607.2 |
| spermidine/putrescine abc transporter atp-binding protein | DIC56_09710 | Not Available | Negative | 1959760 - 1960818 | 38179.3 |
| spermidine/putrescine abc transporter permease | DIC56_09715 | Not Available | Negative | 1960829 - 1961620 | 29006.3 |
| acriflavin resistance protein | DIC56_09720 | Not Available | Negative | 1961617 - 1962492 | 31706.8 |
| iron abc transporter substrate-binding protein | DIC56_09725 | Not Available | Negative | 1962611 - 1963717 | 39214.5 |
| rpir family transcriptional regulator | DIC56_09730 | Not Available | Negative | 1963882 - 1964754 | 32467.7 |
| n-formylglutamate amidohydrolase | DIC56_09735 | Not Available | Positive | 1964930 - 1965712 | 28078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
