Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_09590 | Not Available | Positive | 1928112 - 1928411 | 10775.9 |
| arac family transcriptional regulator | DIC56_09595 | Not Available | Positive | 1928424 - 1929203 | 28998.8 |
| rna polymerase sigma factor rpod | DIC56_09600 | Not Available | Positive | 1929686 - 1931181 | 55948.8 |
| error-prone dna polymerase | DIC56_09605 | Not Available | Negative | 1931182 - 1932322 | 42713.1 |
| nucleotidyltransferase | DIC56_09610 | Not Available | Negative | 1932319 - 1933842 | 55050.4 |
| damage-inducible protein | DIC56_09615 | Not Available | Negative | 1933757 - 1934509 | 26231.6 |
| aaa family atpase | DIC56_09620 | Not Available | Positive | 1934831 - 1935841 | 36930.5 |
| peptidase | DIC56_09625 | Not Available | Positive | 1935894 - 1938446 | 91633.5 |
| hypothetical protein | DIC56_09630 | Not Available | Positive | 1938856 - 1939806 | 35751.6 |
| hypothetical protein | DIC56_09635 | Not Available | Negative | 1939962 - 1940876 | 34168.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
