Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | DIC56_09290 | Not Available | Negative | 1867369 - 1868472 | 39684.6 |
| atp-dependent clp protease adaptor clps | DIC56_09295 | Not Available | Positive | 1868689 - 1869000 | 11805.5 |
| gnat family n-acetyltransferase | DIC56_09300 | Not Available | Negative | 1869007 - 1869456 | 16304.8 |
| aminoacyl-trna hydrolase | DIC56_09305 | Not Available | Negative | 1869458 - 1870177 | 26338.0 |
| abc transporter substrate-binding protein | DIC56_09310 | Not Available | Negative | 1870271 - 1870987 | 27049.7 |
| diguanylate cyclase | DIC56_09315 | Not Available | Negative | 1871018 - 1873393 | 88256.3 |
| 50s ribosomal protein l25 | DIC56_09320 | Not Available | Negative | 1873629 - 1874228 | 21461.8 |
| hypothetical protein | DIC56_09325 | Not Available | Negative | 1874273 - 1874491 | 7781.33 |
| fis family transcriptional regulator | DIC56_09330 | Not Available | Positive | 1874592 - 1875551 | 34465.8 |
| aldehyde dehydrogenase | DIC56_09335 | Not Available | Positive | 1875691 - 1877118 | 52496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
