Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate--coa ligase | DIC56_00680 | Not Available | Positive | 145341 - 146651 | 48682.5 |
| tetr family transcriptional regulator | DIC56_00685 | Not Available | Positive | 146748 - 147347 | 22621.2 |
| phenylacetic acid degradation bifunctional protein paaz | DIC56_00690 | Not Available | Negative | 147432 - 149495 | 73154.3 |
| phenylacetate-coa oxygenase/reductase subunit paak | DIC56_00695 | Not Available | Negative | 149567 - 150643 | 39507.2 |
| phenylacetate-coa oxygenase subunit paaj | DIC56_00700 | Not Available | Negative | 150664 - 151185 | 19080.8 |
| phenylacetate-coa oxygenase subunit paai | DIC56_00705 | Not Available | Negative | 151197 - 151973 | 28561.9 |
| 1,2-phenylacetyl-coa epoxidase subunit b | DIC56_00710 | Not Available | Negative | 151973 - 152257 | 10654.5 |
| 1,2-phenylacetyl-coa epoxidase subunit a | DIC56_00715 | Not Available | Negative | 152320 - 153318 | 37852.9 |
| 3-oxoadipyl-coa thiolase | DIC56_00720 | Not Available | Negative | 153336 - 154541 | 41745.5 |
| paax family transcriptional regulator | DIC56_00725 | Not Available | Negative | 154715 - 155590 | 31919.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
