Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DIC56_09080 | Not Available | Positive | 1828415 - 1828831 | 15809.1 |
| cys-trna(pro)/cys-trna(cys) deacylase | DIC56_09090 | Not Available | Positive | 1830680 - 1831138 | 16270.6 |
| penicillin-binding protein | DIC56_09095 | Not Available | Positive | 1831360 - 1833576 | 78587.0 |
| molecular chaperone dnak | DIC56_09100 | Not Available | Positive | 1833905 - 1834415 | 18412.1 |
| 2-oxobutyrate oxidase | DIC56_09105 | Not Available | Positive | 1834803 - 1835861 | 39015.6 |
| abc transporter substrate-binding protein | DIC56_09110 | Not Available | Positive | 1835977 - 1837002 | 36771.9 |
| abc transporter permease | DIC56_09115 | Not Available | Positive | 1837010 - 1838008 | 35910.6 |
| abc transporter | DIC56_09120 | Not Available | Positive | 1838008 - 1838799 | 29206.2 |
| hypothetical protein | DIC56_09125 | Not Available | Positive | 1838789 - 1839124 | 11916.3 |
| bifunctional o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DIC56_09130 | Not Available | Positive | 1839121 - 1840485 | 48462.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
