Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnk | DIC56_08980 | Not Available | Positive | 1808454 - 1809230 | 28772.8 |
| phosphonate c-p lyase system protein phnl | DIC56_08985 | Not Available | Positive | 1809245 - 1809952 | 25291.7 |
| acetyltransferase | DIC56_08990 | Not Available | Positive | 1809949 - 1810563 | 22585.6 |
| phosphonate abc transporter atp-binding protein | DIC56_08995 | Not Available | Positive | 1810686 - 1811543 | 30940.5 |
| phosphonate abc transporter substrate-binding protein | DIC56_09000 | Not Available | Positive | 1811629 - 1812534 | 31991.8 |
| phosphonate abc transporter, permease protein phne | DIC56_09005 | Not Available | Positive | 1812633 - 1813595 | 35946.4 |
| phosphonate abc transporter, permease protein phne | DIC56_09010 | Not Available | Positive | 1813605 - 1815107 | 55584.5 |
| hypothetical protein | DIC56_09015 | Not Available | Positive | 1815233 - 1815922 | 25344.2 |
| phosphonate metabolism protein phnm | DIC56_09020 | Not Available | Positive | 1815943 - 1817082 | 41409.9 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | DIC56_09025 | Not Available | Positive | 1817082 - 1817690 | 21885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
