Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_08880 | Not Available | Negative | 1787853 - 1788671 | 28873.9 |
| carbon monoxide dehydrogenase | DIC56_08885 | Not Available | Negative | 1788960 - 1789424 | 16023.2 |
| nicotinate phosphoribosyltransferase | DIC56_08890 | Not Available | Negative | 1789507 - 1790811 | 49620.6 |
| hypothetical protein | DIC56_08895 | Not Available | Negative | 1790946 - 1791209 | 9519.34 |
| glyoxylate/hydroxypyruvate reductase a | DIC56_08900 | Not Available | Negative | 1791312 - 1792274 | 34830.9 |
| microcin abc transporter atp-binding protein | DIC56_08905 | Not Available | Negative | 1792292 - 1793920 | 59774.8 |
| peptide abc transporter permease | DIC56_08910 | Not Available | Negative | 1793917 - 1795062 | 42851.6 |
| microcin abc transporter permease | DIC56_08915 | Not Available | Negative | 1795064 - 1796161 | 40767.2 |
| hypothetical protein | DIC56_08920 | Not Available | Negative | 1796305 - 1798161 | 69535.0 |
| penicillin-insensitive murein endopeptidase | DIC56_08925 | Not Available | Positive | 1798357 - 1799433 | 38220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
