Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | DIC56_08775 | Not Available | Negative | 1768687 - 1768872 | 6394.7 |
| hypothetical protein | DIC56_08780 | Not Available | Positive | 1769449 - 1769823 | 12954.6 |
| pilus assembly protein tadg | DIC56_08785 | Not Available | Positive | 1769952 - 1770584 | 23697.2 |
| hypothetical protein | DIC56_08790 | Not Available | Positive | 1770698 - 1771207 | 17924.9 |
| phosphopentomutase | DIC56_08795 | Not Available | Positive | 1771325 - 1772545 | 43506.1 |
| adenosine deaminase | DIC56_08800 | Not Available | Positive | 1772542 - 1773510 | 35220.0 |
| uracil phosphoribosyltransferase | DIC56_08805 | Not Available | Positive | 1773618 - 1774247 | 23299.6 |
| tigr02281 family clan aa aspartic protease | DIC56_08810 | Not Available | Positive | 1774401 - 1774916 | 18299.3 |
| thymidine phosphorylase | DIC56_08815 | Not Available | Negative | 1774919 - 1776226 | 45453.0 |
| deoxyribose-phosphate aldolase | DIC56_08820 | Not Available | Negative | 1776230 - 1777003 | 26664.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
