Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein tadd | DIC56_08725 | Not Available | Positive | 1758225 - 1759046 | 29577.2 |
| threonine transporter | DIC56_08730 | Not Available | Negative | 1759076 - 1759717 | 22198.6 |
| type ii secretion system protein | DIC56_08735 | Not Available | Negative | 1759866 - 1760852 | 36414.8 |
| pilus assembly protein | DIC56_08740 | Not Available | Negative | 1760865 - 1761878 | 37142.4 |
| protein kinase | DIC56_08745 | Not Available | Negative | 1761884 - 1763377 | 54418.4 |
| ctpf protein | DIC56_08750 | Not Available | Negative | 1763410 - 1764699 | 46327.7 |
| pilus assembly protein cpad | DIC56_08755 | Not Available | Negative | 1764734 - 1765426 | 24211.0 |
| pilus assembly protein cpac | DIC56_08760 | Not Available | Negative | 1765489 - 1767078 | 56340.2 |
| flp pilus assembly protein cpab | DIC56_08765 | Not Available | Negative | 1767075 - 1767884 | 28679.8 |
| peptidase | DIC56_08770 | Not Available | Negative | 1768010 - 1768522 | 17914.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
