Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin attachment protein | DIC56_08315 | Not Available | Positive | 1670704 - 1670946 | 8240.86 |
| lipoate--protein ligase | DIC56_08320 | Not Available | Positive | 1670936 - 1671637 | 24882.6 |
| carbamate kinase | DIC56_08325 | Not Available | Negative | 1671766 - 1672686 | 31713.2 |
| ornithine carbamoyltransferase | DIC56_08330 | Not Available | Negative | 1672688 - 1673689 | 36669.1 |
| arginine deiminase | DIC56_08335 | Not Available | Negative | 1673708 - 1674940 | 44794.0 |
| alpha/beta hydrolase | DIC56_08345 | Not Available | Positive | 1676282 - 1677094 | 28402.9 |
| sugar abc transporter substrate-binding protein | DIC56_08350 | Not Available | Positive | 1677121 - 1678320 | 43542.4 |
| sugar abc transporter permease | DIC56_08355 | Not Available | Positive | 1678627 - 1679550 | 33847.3 |
| carbohydrate abc transporter permease | DIC56_08360 | Not Available | Positive | 1679547 - 1680380 | 30096.0 |
| sugar phosphate isomerase/epimerase | DIC56_08365 | Not Available | Positive | 1680406 - 1681287 | 32464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
