Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea carboxylase | DIC56_00580 | Not Available | Positive | 115910 - 119446 | 126513.0 |
| allophanate hydrolase | DIC56_00585 | Not Available | Positive | 119446 - 121260 | 63174.5 |
| duf4212 domain-containing protein | DIC56_00590 | Not Available | Positive | 121897 - 122154 | 9612.8 |
| cation acetate symporter | DIC56_00595 | Not Available | Positive | 122169 - 123935 | 62631.1 |
| histidine kinase | DIC56_00600 | Not Available | Positive | 124027 - 125853 | 66714.5 |
| hypothetical protein | DIC56_00605 | Not Available | Positive | 125867 - 126391 | 19288.5 |
| dna polymerase iii subunit epsilon | DIC56_00610 | Not Available | Positive | 126405 - 128486 | 75204.2 |
| lysr family transcriptional regulator | DIC56_00615 | Not Available | Negative | 128617 - 129546 | 34569.5 |
| esterase | DIC56_00620 | Not Available | Positive | 129902 - 130717 | 28583.2 |
| efflux transporter periplasmic adaptor subunit | DIC56_00625 | Not Available | Positive | 130755 - 131957 | 41709.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
