Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 family rnd transporter | DIC56_07940 | Not Available | Positive | 1583666 - 1586779 | 110768.0 |
| nodulation protein nodt | DIC56_07945 | Not Available | Positive | 1586921 - 1588333 | 49507.7 |
| merr family transcriptional regulator | DIC56_07950 | Not Available | Negative | 1588443 - 1589273 | 30536.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DIC56_07955 | Not Available | Positive | 1589433 - 1590719 | 46131.1 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | DIC56_07960 | Not Available | Positive | 1590716 - 1592200 | 52494.3 |
| elongation factor p | DIC56_07965 | Not Available | Negative | 1592279 - 1592848 | 21067.2 |
| ef-p lysine aminoacylase genx | DIC56_07970 | Not Available | Positive | 1592993 - 1594057 | 39105.1 |
| lysine-2,3-aminomutase-like protein | DIC56_07975 | Not Available | Positive | 1594054 - 1595094 | 37722.7 |
| acyl carrier protein | DIC56_07980 | Not Available | Positive | 1595304 - 1595555 | 8949.8 |
| acyl-coa dehydrogenase | DIC56_07985 | Not Available | Positive | 1595555 - 1596736 | 42423.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
