Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase | DIC56_07840 | Not Available | Positive | 1558953 - 1559945 | 34807.7 |
| dihydroxyacetone kinase subunit l | DIC56_07845 | Not Available | Positive | 1559958 - 1560602 | 22059.6 |
| 3,4-dihydroxy-2-butanone kinase | DIC56_07850 | Not Available | Positive | 1560758 - 1562842 | 74444.5 |
| dihydroxyacetone kinase subunit l | DIC56_07855 | Not Available | Positive | 1562904 - 1563551 | 22390.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DIC56_07860 | Not Available | Positive | 1564084 - 1564722 | 22742.4 |
| abc transporter atp-binding protein | DIC56_07865 | Not Available | Negative | 1564950 - 1566386 | 51031.4 |
| dna-binding transcriptional regulator | DIC56_07870 | Not Available | Positive | 1566604 - 1567560 | 34489.6 |
| dihydroxyacetone kinase | DIC56_07875 | Not Available | Negative | 1567567 - 1569333 | 61456.4 |
| abc transporter permease | DIC56_07880 | Not Available | Negative | 1569371 - 1570333 | 32987.1 |
| sugar abc transporter atp-binding protein | DIC56_07885 | Not Available | Negative | 1570323 - 1571822 | 54287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
