Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | DIC56_07785 | Not Available | Negative | 1546660 - 1548681 | 72345.2 |
| deor family transcriptional regulator | DIC56_07790 | Not Available | Positive | 1548835 - 1549605 | 28313.4 |
| triose-phosphate isomerase | DIC56_07795 | Not Available | Positive | 1549609 - 1550388 | 28424.0 |
| ribose-5-phosphate isomerase | DIC56_07800 | Not Available | Positive | 1550401 - 1550862 | 16018.0 |
| dihydroxyacetone kinase subunit l | DIC56_07810 | Not Available | Positive | 1552073 - 1552690 | 21134.5 |
| is5 family transposase | DIC56_07815 | Not Available | Positive | 1553105 - 1553927 | 31177.0 |
| d-xylose abc transporter atp-binding protein | DIC56_07820 | Not Available | Positive | 1554464 - 1555942 | 53212.3 |
| sugar abc transporter permease | DIC56_07825 | Not Available | Positive | 1555995 - 1556999 | 34715.1 |
| sugar abc transporter substrate-binding protein | DIC56_07830 | Not Available | Positive | 1557093 - 1558079 | 35024.7 |
| d-threitol dehydrogenase | DIC56_07835 | Not Available | Positive | 1558145 - 1558918 | 26325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
