Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter permease | DIC56_07350 | Not Available | Positive | 1460003 - 1461328 | 46845.5 |
| flavin reductase | DIC56_07355 | Not Available | Negative | 1461412 - 1461915 | 17876.3 |
| pyoverdin chromophore biosynthetic protein pvcc | DIC56_07360 | Not Available | Negative | 1461926 - 1463488 | 58041.1 |
| arac family transcriptional regulator | DIC56_07365 | Not Available | Positive | 1463591 - 1464469 | 32464.2 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | DIC56_07370 | Not Available | Positive | 1464570 - 1464956 | 14243.1 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | DIC56_07375 | Not Available | Positive | 1464969 - 1466486 | 53904.6 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | DIC56_07380 | Not Available | Positive | 1466605 - 1467585 | 37242.4 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DIC56_07385 | Not Available | Positive | 1467655 - 1468521 | 31620.7 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | DIC56_07390 | Not Available | Positive | 1468525 - 1469328 | 29173.1 |
| 4-hydroxy-2-oxoheptanedioate aldolase | DIC56_07395 | Not Available | Positive | 1469342 - 1470109 | 26395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
