Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | DIC56_07140 | Not Available | Positive | 1428861 - 1429208 | 11976.2 |
| tetr family transcriptional regulator | DIC56_07145 | Not Available | Positive | 1429208 - 1429780 | 20674.7 |
| had family hydrolase | DIC56_07150 | Not Available | Positive | 1429882 - 1430571 | 24791.0 |
| hypothetical protein | DIC56_07155 | Not Available | Negative | 1430808 - 1431026 | 7788.63 |
| 1,2-phenylacetyl-coa epoxidase subunit a | DIC56_07160 | Not Available | Negative | 1431027 - 1431338 | 11985.2 |
| paax family transcriptional regulator | DIC56_07170 | Not Available | Negative | 1432480 - 1433355 | 31664.3 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | DIC56_07175 | Not Available | Negative | 1433586 - 1433808 | 8338.21 |
| urease accessory protein | DIC56_07180 | Not Available | Negative | 1433809 - 1434508 | 24856.7 |
| polyhydroxybutyrate depolymerase | DIC56_07185 | Not Available | Negative | 1434451 - 1435599 | 40375.5 |
| urea abc transporter atp-binding subunit urte | DIC56_07190 | Not Available | Negative | 1435696 - 1436391 | 25232.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
