Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DIC56_06920 | Not Available | Positive | 1388632 - 1389393 | 26867.4 |
| lysr family transcriptional regulator | DIC56_06925 | Not Available | Negative | 1389560 - 1390855 | 47507.2 |
| pig-l domain-containing protein | DIC56_06930 | Not Available | Positive | 1391253 - 1391999 | 27924.2 |
| catechol 2,3-dioxygenase | DIC56_06935 | Not Available | Positive | 1392013 - 1392966 | 36012.3 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | DIC56_06940 | Not Available | Positive | 1392968 - 1393639 | 23423.3 |
| 4-oxalomesaconate tautomerase | DIC56_06945 | Not Available | Positive | 1393632 - 1394717 | 37725.2 |
| duf305 domain-containing protein | DIC56_06950 | Not Available | Positive | 1394852 - 1394984 | 4470.21 |
| nitrite reductase, copper-containing | DIC56_06955 | Not Available | Negative | 1395079 - 1396092 | 35747.2 |
| polyketide cyclase | DIC56_06960 | Not Available | Negative | 1396284 - 1396670 | 14336.7 |
| haloacid dehalogenase | DIC56_06965 | Not Available | Negative | 1396878 - 1399001 | 74279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
