Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_06870 | Not Available | Positive | 1368292 - 1375959 | 263743.0 |
| type i secretion system permease/atpase | DIC56_06875 | Not Available | Positive | 1376053 - 1377774 | 61099.7 |
| hypothetical protein | DIC56_06880 | Not Available | Positive | 1377798 - 1380248 | 82989.5 |
| hlyd family type i secretion periplasmic adaptor subunit | DIC56_06885 | Not Available | Positive | 1380320 - 1381645 | 48082.5 |
| hypothetical protein | DIC56_06890 | Not Available | Positive | 1381674 - 1382864 | 42492.2 |
| helix-turn-helix transcriptional regulator | DIC56_06895 | Not Available | Negative | 1383431 - 1384198 | 28739.6 |
| spermidine/putrescine abc transporter atp-binding protein | DIC56_06900 | Not Available | Positive | 1384426 - 1385514 | 39377.7 |
| potassium transporter trk | DIC56_06905 | Not Available | Positive | 1385557 - 1386717 | 41872.7 |
| abc transporter permease | DIC56_06910 | Not Available | Positive | 1386938 - 1387804 | 31222.5 |
| abc transporter permease | DIC56_06915 | Not Available | Positive | 1387804 - 1388628 | 29253.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
