Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | DIC56_06610 | Not Available | Positive | 1310889 - 1314041 | 114220.0 |
| hypothetical protein | DIC56_06615 | Not Available | Positive | 1314100 - 1314435 | 11081.1 |
| nitrite reductase, copper-containing | DIC56_06620 | Not Available | Positive | 1314578 - 1315648 | 37775.6 |
| metal-binding protein | DIC56_06625 | Not Available | Positive | 1315773 - 1316222 | 15585.8 |
| dna polymerase iii subunit gamma/tau | DIC56_06635 | Not Available | Positive | 1316473 - 1318350 | 67745.9 |
| ybab/ebfc family nucleoid-associated protein | DIC56_06640 | Not Available | Positive | 1318392 - 1318715 | 11575.5 |
| accessory colonization factor | DIC56_06645 | Not Available | Positive | 1319060 - 1319860 | 29076.2 |
| recombination protein recr | DIC56_06650 | Not Available | Positive | 1320016 - 1320621 | 21413.1 |
| lytic murein transglycosylase | DIC56_06655 | Not Available | Positive | 1320661 - 1321899 | 44739.5 |
| mfs transporter | DIC56_06660 | Not Available | Negative | 1321906 - 1323534 | 58652.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
