Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_00430 | Not Available | Positive | 84636 - 84827 | 7167.19 |
| acyl-coa dehydrogenase | DIC56_00435 | Not Available | Negative | 85210 - 86787 | 57484.6 |
| 3-hydroxyacyl-coa dehydrogenase | DIC56_00440 | Not Available | Negative | 86793 - 87554 | 26041.6 |
| feruloyl-coa synthase | DIC56_00445 | Not Available | Negative | 87551 - 89404 | 67992.3 |
| enoyl-coa hydratase | DIC56_00450 | Not Available | Positive | 89546 - 90340 | 28172.5 |
| marr family transcriptional regulator | DIC56_00455 | Not Available | Positive | 90351 - 90821 | 17285.9 |
| 4-hydroxyphenyl-beta-ketoacyl-coa hydrolase | DIC56_00460 | Not Available | Positive | 90818 - 91693 | 33009.5 |
| c4-dicarboxylate abc transporter substrate-binding protein | DIC56_00465 | Not Available | Positive | 91737 - 92852 | 39826.6 |
| trap transporter small permease | DIC56_00470 | Not Available | Positive | 92922 - 93437 | 18553.4 |
| c4-dicarboxylate abc transporter | DIC56_00475 | Not Available | Positive | 93434 - 94741 | 45066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
