Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | DIC56_06100 | Not Available | Positive | 1223793 - 1224236 | 16505.5 |
| stress responsive protein | DIC56_06105 | Not Available | Positive | 1224338 - 1224646 | 11157.5 |
| atp-dependent clp protease proteolytic subunit | DIC56_06110 | Not Available | Negative | 1224867 - 1225478 | 22777.7 |
| hypothetical protein | DIC56_06115 | Not Available | Negative | 1225525 - 1225884 | 13328.8 |
| transcriptional regulator | DIC56_06120 | Not Available | Negative | 1225881 - 1226195 | 11895.5 |
| peroxiredoxin | DIC56_06125 | Not Available | Negative | 1226438 - 1226923 | 17081.5 |
| cytochrome c biogenesis protein | DIC56_06130 | Not Available | Negative | 1226993 - 1227781 | 27517.9 |
| yqge/algh family protein | DIC56_06135 | Not Available | Positive | 1228004 - 1228609 | 21788.2 |
| sensor domain-containing phosphodiesterase | DIC56_06140 | Not Available | Negative | 1228625 - 1231537 | 107200.0 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | DIC56_06145 | Not Available | Negative | 1231534 - 1232148 | 23706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
